Game is running fine in the editor, but after building the game, script acts differently than in editor.

Steps to reproduce:
1.Open attached project
2.Open altworld-0041 solved UnityEditor error.unity scene
3.Enter play mode
4.Place some capsules, capsule count decreases by one, you can pick back the capsules
5.Build windows standalone
6.Open the built project
7.Place some capsules, capsule count decreases by two, and you cannot pick them back

Expected result:same behaviour in built project as in editor
Actual result:different behaviour between editor and built project

Reprodused on: 5.5.1f1, 5.6.0b8

Unable to check for regression because no backward compatibility.

Win 10 Pro