Reproduction steps:
1. Open the attached “SerializedRefsNestedPrefabsBug.zip“ project
2. Open the “scene-bug” Scene (Assets > Scenes)
3. Expand the “prefab-parent” GameObject from the Hierarchy
4. Select the “prefab-child” GameObject
5. In the Inspector, toggle the “Set To Test Bool” property
6. Right click on the “Tb” property
7. Click “Apply to Prefab ‘prefab-child’
8. Observe the Console

Expected result: No errors
Actual result: “ApplySingleProperty clear overrides error: SerializedProperty could not be found for tb.boolValue. Please report a bug.” error

Reproducible with: 2021.3.45f1, 2022.3.51f1, 6000.0.25f1, 6000.1.0a2

Reproduced on: Windows 11
Not reproducible on: No other environment tested